BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016G12LP1|AL427074
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1011 863 0.0
3x_Contig1681 585 e-167
>3x_Contig1011
Length = 3580
Score = 863 bits (434), Expect = 0.0
Identities = 434/434 (100%)
Strand = Plus / Plus
Query: 1 ttcaaatgagtgatttttatcggatattgatgtcctgtataggaaaataagaaagtcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3147 ttcaaatgagtgatttttatcggatattgatgtcctgtataggaaaataagaaagtcttg 3206
Query: 61 acttttttcctttctttcacaaactagcgatggcagattgaggacagaaagatatgcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3207 acttttttcctttctttcacaaactagcgatggcagattgaggacagaaagatatgcaac 3266
Query: 121 acaatgtagcagtagcagcagcagtagtaacgaaagtgtctatcctatgcccaatagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3267 acaatgtagcagtagcagcagcagtagtaacgaaagtgtctatcctatgcccaatagtat 3326
Query: 181 tgtattagtatcaatattaatatcaaaattattattagtatttataatgtggcgaaaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3327 tgtattagtatcaatattaatatcaaaattattattagtatttataatgtggcgaaaccc 3386
Query: 241 ataaaaataaacaacaataacaacaaaataaacggagaattatcgtgccttgaagtattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3387 ataaaaataaacaacaataacaacaaaataaacggagaattatcgtgccttgaagtattc 3446
Query: 301 taccgacacgcaccacaaaccgaaacttaagtataatcgttttattatcagaaaaccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3447 taccgacacgcaccacaaaccgaaacttaagtataatcgttttattatcagaaaaccttt 3506
Query: 361 tacagaagaagaaggagaaggagaagaagtagacgtatattaatgtaacagtaagcagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3507 tacagaagaagaaggagaaggagaagaagtagacgtatattaatgtaacagtaagcagaa 3566
Query: 421 ctcgtgacagaaaa 434
||||||||||||||
Sbjct: 3567 ctcgtgacagaaaa 3580
>3x_Contig1681
Length = 11798
Score = 585 bits (294), Expect = e-167
Identities = 319/329 (96%)
Strand = Plus / Minus
Query: 572 ccactaatgagtaaaacaactttcaaattctccccgcccctcgtttctcgttgttccacg 631
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11798 ccactaatgagtaaaacaactttcaaattctcnccgcccctcgtttctcgttgttccacg 11739
Query: 632 tactttaaccaaacttgacaacatacttgawaacattcacacaaaagtgcctatggcaaa 691
|||||| || ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11738 tactttccccccccttgacaacatacttgaaaacattcacacaaaagtgcctatggcaaa 11679
Query: 692 taaggaatgattaactccattggtatactgagacagtgtgactcctgcagtacgcataaa 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11678 taaggaatgattaactccattggtatactgagacagtgtgactcctgcagtacgcataaa 11619
Query: 752 gttccaggttttttttgttgttaccattaccactatctacaatcccataataagtcttaa 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11618 gttccaggttttttttgttgttaccattaccactatctacaatcccataataagtcttaa 11559
Query: 812 tcaccacgtaattctactgagccatccaaacagtccaatgtaaaggggatcaatcggrta 871
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 11558 tcaccacgtaattctactgagccatccaaacagtccaatgtaaagggaatcaatcggata 11499
Query: 872 gctcaaaactctctcataaaccctctctg 900
||||||||||||||||||| |||||||||
Sbjct: 11498 gctcaaaactctctcataacccctctctg 11470
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8332
Number of Sequences: 1807
Number of extensions: 8332
Number of successful extensions: 199
Number of sequences better than 1.0e-20: 2
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)